New team member Killian Duguépéroux joins the team as an intern for 7 weeks. He is a Bachelor student in computer science at ENS Lyon and will be supervised by Guilhem Sommeria-Klein and myself.
[June 2025]
Publication A part of Nicolas Maurice's PhD work is now published in Bioinformatics - Mapler, A pipeline for assessing assembly quality in taxonomically rich metagenomes sequenced with HiFi reads. More info here.
[June 2025]
Conference JOBIM Conference is happening next month! Come to Bordeaux and meet the French Bioinformatics community. We expect 500 attendees. Information and registration.
[April 2025]
Job advert Job alert! We are hiring a postdoc (18 mo + 14 mo) in metabolic modelling of rumen microbial communities. More info here.
[April 2025]
Publication The PhD work of Chabname Ghassemi Nedjad is published in Bioinformatics - inference of seed metabolites from metabolic networks. More info here.
[April 2025]
Job advert Job alert! We are hiring a postdoc (2 + 2 years) in metabolic modelling for uncultured minimal bacteria. More info here.
[March 2025]
Publication New preprint - Mapler, Assessing assembly quality in taxonomically rich metagenomes sequenced with HiFi reads. Read more on BioRxiv.
2024
[December 2024]
Publication New preprint - Modeling the emergent metabolic potential of soil microbiomes in Atacama landscapes, on BioRxiv.
[November 2024]
Conference organisation Simon Labarthe from Pleiade, other colleagues from Bordeaux and myself oganise the JOBIM 2025 Conference, the French national conference on Bioinformatics.
[November 2024]
New team member Juliette Audemard is coming back to the team for her master's project.
Conference I will be a keynote speaker at the French conference of computational biology JOBIM 2024.
[April 2024]
PhD defense Maxime Lecomte defended his PhD on explainable approaches of metabolic modelling to decipher microbial ecosystems.
[April 2024]
New team member Juliette Audemard, a masters student in computational biology at Université Paris Cité joined the team for a 5 month internship (COMIC INRAE project).